Cymbidium mosaic virus
TaxID: 12178
Basic Information
Cymbidium mosaic virus
Cymbidium Mosaic Virus
Cymbidium mosaic virus (CymMV) is a plant pathogenic virus of the family Alphaflexiviridae. Cymbidium mosaic virus and the Odontoglossum ringspot virus (ORSV) are two of the most common viruses affecting cultivated orchids worldwide. Infected plants can have less desirable flowers or other problems, causing significant financial losses to orchid growers. The virus has not often been reported in wild orchid populations. It can be found in a wide variety of orchid genera but does not infect plants other than orchids. Once an orchid is infected, the virus spreads throughout the infected plant in a number of weeks. Control measures may include sanitizing pruning equipment between plants. There is an ELISA test available to test for presence of the virus. It is related to the Narcissus mosaic virus (NMV), the Scallion virus X (SVX), the Pepino mosaic virus (PepMV) and the Potato aucuba mosaic virus (PAMV).
from Wikipedia
Taxonomic Information
unclassified
Kitrinoviricota
Alsuviricetes
Tymovirales
Alphaflexiviridae
Potexvirus
Potexvirus cymbidii
nan
No Rank
nan
k__unclassified;p__Kitrinoviricota;c__Alsuviricetes;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Potexvirus cymbidii
nan
Viruses/Viroids
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (10 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Argentina | Absent | — |
| Bangladesh | Quarantine pests | — |
| Sri Lanka | Quarantine pests | — |
| Mexico | Quarantine pests | — |
| Malaysia | Quarantine pests | — |
| New Caledonia | Quarantine pests | — |
| Nicaragua | Absent | — |
| Paraguay | Quarantine pests | — |
| French Polynesia | Quarantine pests | — |
| Uruguay | Absent | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_000865585.1 | Complete Genome | - | 6 | 6 | - |
|
|
|
ViralProj15490 |
|||||||
Transcriptomes (1 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR30799897 | - | - | - | 23278875 | Mexico: Manzanillo, Colima | |
|
PRJNA1158807 SRX26200733 SRP534818 virus CO005bdCymbidium mosaic virus The cDNA library was constructed using the Illumina TruSeq Stranded Total RNA Library Prep Plant kit (Illumina, Inc., San Diego, CA, USA) following the modified Illumina Ribo-Zero Total RNA recommendations. The quality and quantity of the unique dual-indexed cDNA libraries were analyzed using a 4200 TapeStation instrument (Agilent, Santa Clara, CA, USA), and Qubit Flex Fluorometer with dsDNA High Sensitivity kit. Pair-end sequencing was conducted using a NextSeq 550 system with 2 75 bp (V2) Hi-output sequencing reagent kits (Illumina, San Diego, CA, USA). CO005bd {'host': 'Dendrobium', 'isolate': 'CO005bd', 'altitude': '19.8 N, 104.25 W', 'collected_by': 'Gabriel Otero-Colina', 'geo_loc_name': 'Mexico: Manzanillo, Colima', 'biosamplemodel': 'Viral', 'collection_date': '2021-06', 'isolation_source': 'leaf'} |
||||||
Literature
Fetching literature from NCBI PubMed...
Failed to fetch literature