Meloidogyne hapla
TaxID: 6305
Basic Information
Meloidogyne hapla
Northern Root-knot Nematode, Northern root knot nematode
Northern root-knot nematode (Meloidogyne hapla) is a species of vegetable pathogens which produces tiny galls on around 550 crop and weed species. They invade root tissue after birth. Females are able to lay up to 1,000 eggs at a time in a large egg mass. By surviving harsh winters, they can survive in cold climates (hence, the name, Northern).
from Wikipedia
Taxonomic Information
Eukaryota
Nematoda
Chromadorea
Rhabditida
Meloidogynidae
Meloidogyne
hapla
-
Species
nan
d__Eukaryota;p__Nematoda;c__Chromadorea;o__Rhabditida;f__Meloidogynidae;g__Meloidogyne;s__Meloidogyne hapla
nan
Nematodes
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (34 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Austria | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Belgium | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Bulgaria | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Switzerland | Regulated non-quarantine pest | 2019 |
| Cyprus | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Czechia | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Germany | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Denmark | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Spain | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Estonia | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
Distribution (10 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Present | — |
| China | Present | — |
| Germany | Present | — |
| France | Present | — |
| Morocco | Present | — |
| Mexico | Present | — |
| Netherlands | Present | — |
| Singapore | Present | — |
| Sweden | Present | — |
| United States of America | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_000172435.1 | Contig | 53 | 37 | 37 | - |
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Freeze_1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR37491666 | whole-organism | - | - | 49600769 | not applicable | |
|
PRJNA1432107 SRX32387374 SRP681333 general Meloidogyne hapla infection of medicago and soybean roots Infected root tissue (galls) were dissected three weeks post inoculation and RNA extracted for library prep and RNA-Seq. VW9 {'age': '3 weeks post-inoculation', 'host': 'Medicago truncatula Jemalong A17', 'tissue': 'whole-organism', 'isolate': 'VW9', 'biosamplemodel': 'Invertebrate', 'collection_date': '2010', 'host_tissue_sampled': 'root', 'biological replicate': 'medicago_VW9_4'} |
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| SRR37491665 | whole-organism | - | - | 18299966 | not applicable | |
|
PRJNA1432107 SRX32387375 SRP681333 general Meloidogyne hapla infection of medicago and soybean roots Infected root tissue (galls) were dissected three weeks post inoculation and RNA extracted for library prep and RNA-Seq. LM {'age': '3 weeks post-inoculation', 'host': 'Glycine max Williams-82', 'tissue': 'whole-organism', 'isolate': 'LM', 'biosamplemodel': 'Invertebrate', 'collection_date': '2017', 'host_tissue_sampled': 'root', 'biological replicate': 'soybean_LM_1'} |
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| SRR37491664 | whole-organism | - | - | 18428091 | not applicable | |
|
PRJNA1432107 SRX32387376 SRP681333 general Meloidogyne hapla infection of medicago and soybean roots Infected root tissue (galls) were dissected three weeks post inoculation and RNA extracted for library prep and RNA-Seq. LM {'age': '3 weeks post-inoculation', 'host': 'Glycine max Williams-82', 'tissue': 'whole-organism', 'isolate': 'LM', 'biosamplemodel': 'Invertebrate', 'collection_date': '2017', 'host_tissue_sampled': 'root', 'biological replicate': 'soybean_LM_1'} |
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DNA Barcodes (56 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| GBMNC35062-20 | - | COI-3P | 413 | - | - | - | |
| GBMNC35061-20 | - | COI-3P | 413 | - | - | - | |
| GBMNC35060-20 | - | COI-3P | 413 | - | - | - | |
| GBMNC35059-20 | - | COI-3P | 413 | - | - | - | |
| GBMNC35058-20 | - | COI-3P | 413 | - | - | - | |
| GBMNC35057-20 | - | COI-3P | 413 | - | - | - | |
| GBMNA9209-19 | - | COI-3P | 444 | - | - | - | |
| GBMNA7165-19 | - | COI-3P | 444 | - | - | - | |
| GBMNA7164-19 | - | COI-3P | 444 | - | - | - | |
| GBMNA7163-19 | - | COI-3P | 444 | - | - | - |
Literature
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