Dickeya zeae

EC1-1

Transcriptiome

{'host': 'Rice', 'strain': 'wild-type EC1', 'geo_loc_name': 'China: Guangzhou', 'biosamplemodel': 'Microbe, viral or environmental'}

RNA-Seq of Dickeya zeae: the wild type strain cultured with putrescine

All cells were incubated at 28 C in swimming motility medium containing 0.5% Bacto-tryptone, 0.5% NaCl and supplemented with putrescine (final concentration was 0.1mM)to OD600 = 0.6

{'host': 'Rice rot', 'sample_type': 'cell culture, the wild type strain cultured in swimming motility medium with putrescine at the final concentration of 0.1 mM to OD600 of 0.6, then collected bacterial cells to extract total RNA', 'geo_loc_name': 'China:Guangzhou', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2018-09-10'}

RNA-Seq of Dickeya zeae: the wild type strain

All cells were incubated at 28 C in swimming motility medium containing 0.5% Bacto-tryptone and 0.5% NaCl to OD600 = 0.6

{'host': 'Rice rot', 'sample_type': 'cell culture, the wild type strain cultured in swimming motility medium to OD600 of 0.6, then collected bacterial cells to extract total RNA', 'geo_loc_name': 'China:Guangzhou', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2018-09-10'}