Colletotrichum truncatum
TaxID: 5467
Basic Information
Colletotrichum truncatum
Ripe Rot of Capsicum
Colletotrichum truncatum is a fungal species and plant pathogen on soybeans. They are endophytic on Euphorbia hirta with another plant pathogen Uromyces euphorbiae (in the Pucciniaceae family and Pucciniales order).
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Glomerellales
Glomerellaceae
Colletotrichum
truncatum
Undefined
Species
nan
d__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Glomerellales;f__Glomerellaceae;g__Colletotrichum;s__Colletotrichum truncatum
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (10 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Angola | Quarantine pests | — |
| Chile | Quarantine pests | 2019 |
| Ecuador | Quarantine pests | — |
| Egypt | Regulated non-quarantine pest | 2018 |
| Mexico | Quarantine pests | — |
| Mozambique | Quarantine pests | — |
| Malaysia | Quarantine pests | — |
| Panama | Quarantine pests | — |
| Paraguay | Quarantine pests | — |
| Sao Tome and Principe | Quarantine pests | — |
Distribution (39 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Present | — |
| Cambodia | Present | — |
| Canada | Present | — |
| China | Present | — |
| Côte d'Ivoire | Present | — |
| Cook Islands | Present | — |
| Colombia | Present | — |
| Costa Rica | Present | — |
| Germany | Present | — |
| Denmark | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_002632455.2 | Scaffold | 57 | 29 | 2268 | - |
|
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ASM263245v2 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR33546344 | - | - | - | 22906913 | China:Hunan | |
|
PRJNA1261628 SRX28780124 SRP584948 fungi RNA-Seq RNA WX4_Z_2 {'strain': 'WX4_Z_2', 'lat_lon': '28.20 N 113.09 E', 'collected_by': 'Yuxiang Peng', 'geo_loc_name': 'China:Hunan', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2023-06-18', 'isolation_source': 'WX-pH4-2'} |
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| SRR33546343 | - | - | - | 21142826 | China:Hunan | |
|
PRJNA1261628 SRX28780125 SRP584948 fungi RNA-Seq RNA WX4_Z_3 {'strain': 'WX4_Z_3', 'lat_lon': '28.20 N 113.09 E', 'collected_by': 'Yuxiang Peng', 'geo_loc_name': 'China:Hunan', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2023-06-18', 'isolation_source': 'WX-pH4-3'} |
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| SRR33546342 | - | - | - | 23297825 | China:Hunan | |
|
PRJNA1261628 SRX28780126 SRP584948 fungi RNA-Seq RNA WX7_Z_1 {'strain': 'WX7_Z_1', 'lat_lon': '28.20 N 113.09 E', 'collected_by': 'Yuxiang Peng', 'geo_loc_name': 'China:Hunan', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2023-06-18', 'isolation_source': 'WX-pH7-A'} |
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Literature
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