Fusarium virguliforme
TaxID: 232082
Basic Information
Fusarium virguliforme
Sudden Death Syndrome of Soybean
Sudden death syndrome (SDS), a disease in soybean plants, quickly spread across the southern United States in the 1970s, eventually reaching most agricultural areas of the US. SDS is caused by multiple Fusarium fungi in the Fusarium solani complex. Fusarium virguliforme is the sole causal agent in North America. In South America, Fusarium brasiliense, F. cuneirostrum, F. tucumaniae, and F. virguliforme are all causal agents. Losses could exceed hundreds of millions of dollars in US soybean markets alone making it one of the most important diseases found in Soybeans across the US.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Hypocreales
Nectriaceae
Fusarium
virguliforme
Undefined
Species
nan
d__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Hypocreales;f__Nectriaceae;g__Fusarium;s__Fusarium virguliforme
nan
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| China | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_001680525.1 | Contig | 49 | 5 | 5 | - |
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ASM168052v1 |
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Transcriptomes (4 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR14211834 | - | - | - | 30650325 | USA | |
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PRJNA688008 SRX10578488 SRP314425 fungi RNA-Seq of Fusarium virguliforme ARLE-C3a Fungal strain grown in half strength potato dextrose broth ARLE-A1, ARLE-C3a {'host': 'Glycine max', 'strain': 'ARLE-A1, ARLE-C3a', 'sample_type': 'whole organism', 'geo_loc_name': 'USA', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2012'} |
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| SRR14211833 | - | - | - | 28430453 | USA | |
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PRJNA688008 SRX10578489 SRP314425 fungi RNA-Seq of Fusarium virguliforme ARLE-C3a Fungal strain grown in half strength potato dextrose broth ARLE-A1, ARLE-C3a {'host': 'Glycine max', 'strain': 'ARLE-A1, ARLE-C3a', 'sample_type': 'whole organism', 'geo_loc_name': 'USA', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2012'} |
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| SRR14211832 | - | - | - | 28633058 | USA | |
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PRJNA688008 SRX10578490 SRP314425 fungi RNA-Seq of Fusarium virguliforme ARLE-C3a treated with fluopyram Fungal strain grown in half strength potato dextrose broth ARLE-A1, ARLE-C3a {'host': 'Glycine max', 'strain': 'ARLE-A1, ARLE-C3a', 'sample_type': 'whole organism', 'geo_loc_name': 'USA', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2012'} |
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| SRR1382101 | - | - | - | 175278569 | - | |
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PRJNA248018 SRX591751 SRP043152 Fusarium virguliforme Mont1 In Vitro Transcriptome Total RNA were extracted from mycelia and quality control by Bioanalyzer with RIN score above 9.0. Six libraries (three replications of two culture condition) were constructed by TruSeq Stranded RNAseq Sample Prep Kit (Illumina). Mont1 {'strain': 'Mont1', 'geo_loc_name': 'USA:Illinois', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '1991-08-01', 'isolation_source': 'soybean'} |
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Literature
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