Pogonomyrmex
TaxID: 144030
Basic Information
Pogonomyrmex
Harvester Ants
Pogonomyrmex is a genus of harvester ants, occurring primarily in the deserts of North, Central, and South America, with three endemic species from Haiti.
from Wikipedia
Taxonomic Information
Eukaryota
Arthropoda
Insecta
Hymenoptera
Formicidae
Pogonomyrmex
nan
nan
Genus
nan
k__Eukaryota;p__Arthropoda;c__Insecta;o__Hymenoptera;f__Formicidae;g__Pogonomyrmex;s__unclassified
nan
Arthropods
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| United States of America | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (0 records)
Data source: NCBI.
No genome records available.
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR17859250 | larva | Second instar larva (72 hours after hatching) | female | 39909942 | USA: Scottdale, Arizona | |
|
PRJNA802583 SRX14020130 SRP357812 insect RNA-seq of Pogonomyrmex rugosus J lineages: second instar larvae (72 hours after hatching) RNA extraction using TRIzol (Life Technologies), library protocol NEBNext UltraII RNA L2_worker_413_rep2 {'sex': 'female', 'breed': 'seed harvester ant', 'tissue': 'larva', 'isolate': 'L2_worker_413_rep2', 'dev_stage': 'Second instar larva (72 hours after hatching)', 'collected_by': 'Eleonore Genzoni', 'geo_loc_name': 'USA: Scottdale, Arizona', 'sample_caste': 'worker', 'biosamplemodel': 'Invertebrate', 'collection_date': '2019-03-06/2019-05-29', 'env_broad_scale': 'lab colonies', 'isolation_source': 'desert Arizona', 'biomaterial_provider': 'Prof. Laurent Keller lab', 'genotype_of_the_sample': 'J1J2', 'lineage_of_the_mother_queen': 'J1'} |
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| SRR17859249 | larva | Second instar larva (72 hours after hatching) | female | 39060184 | USA: Scottdale, Arizona | |
|
PRJNA802583 SRX14020131 SRP357812 insect RNA-seq of Pogonomyrmex rugosus J lineages: second instar larvae (72 hours after hatching) RNA extraction using TRIzol (Life Technologies), library protocol NEBNext UltraII RNA L2_worker_413_rep3 {'sex': 'female', 'breed': 'seed harvester ant', 'tissue': 'larva', 'isolate': 'L2_worker_413_rep3', 'dev_stage': 'Second instar larva (72 hours after hatching)', 'collected_by': 'Eleonore Genzoni', 'geo_loc_name': 'USA: Scottdale, Arizona', 'sample_caste': 'worker', 'biosamplemodel': 'Invertebrate', 'collection_date': '2019-03-06/2019-05-29', 'env_broad_scale': 'lab colonies', 'isolation_source': 'desert Arizona', 'biomaterial_provider': 'Prof. Laurent Keller lab', 'genotype_of_the_sample': 'J1J2', 'lineage_of_the_mother_queen': 'J1'} |
||||||
| SRR17859248 | larva | Second instar larva (72 hours after hatching) | female | 31587740 | USA: Scottdale, Arizona | |
|
PRJNA802583 SRX14020132 SRP357812 insect RNA-seq of Pogonomyrmex rugosus J lineages: second instar larvae (72 hours after hatching) RNA extraction using TRIzol (Life Technologies), library protocol NEBNext UltraII RNA L2_gyne_411_rep1 {'sex': 'female', 'breed': 'seed harvester ant', 'tissue': 'larva', 'isolate': 'L2_gyne_411_rep1', 'dev_stage': 'Second instar larva (72 hours after hatching)', 'collected_by': 'Eleonore Genzoni', 'geo_loc_name': 'USA: Scottdale, Arizona', 'sample_caste': 'gyne', 'biosamplemodel': 'Invertebrate', 'collection_date': '2019-03-06/2019-05-29', 'env_broad_scale': 'lab colonies', 'isolation_source': 'desert Arizona', 'biomaterial_provider': 'Prof. Laurent Keller lab', 'genotype_of_the_sample': 'J1J2', 'lineage_of_the_mother_queen': 'J2'} |
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DNA Barcodes (1117 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| USFOR529-10 | BOLD:ADJ9822 | COI-5P | 613 | United States | 2009-06-13 | 40.642, -104.411 | |
| USFOR528-10 | BOLD:ADJ9822 | COI-5P | 657 | United States | 2009-06-13 | 40.642, -104.411 | |
| USFOR527-10 | BOLD:ADJ9822 | COI-5P | 657 | United States | 2009-06-13 | 40.642, -104.411 | |
| USFOR526-10 | BOLD:ADJ9822 | COI-5P | 658 | United States | 2009-06-13 | 40.642, -104.411 | |
| USFOR525-10 | BOLD:ADJ9822 | COI-5P | 655 | United States | 2009-06-13 | 40.642, -104.411 | |
| USFOR518-10 | BOLD:ADJ9822 | COI-5P | 658 | United States | 2009-06-13 | 40.642, -104.411 | |
| USFOR493-10 | BOLD:ADJ9822 | COI-5P | 658 | United States | 2009-06-07 | 38.708, -104.841 | |
| USFOR492-10 | BOLD:ADJ9822 | COI-5P | 658 | United States | 2009-06-07 | 38.708, -104.841 | |
| USFOR491-10 | BOLD:ADJ9822 | COI-5P | 658 | United States | 2009-06-07 | 38.708, -104.841 | |
| USFOR490-10 | BOLD:ADJ9822 | COI-5P | 620 | United States | 2009-06-07 | 38.708, -104.841 |
Literature
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