Diaporthe caulivora
TaxID: 60444
Basic Information
Diaporthe caulivora
Stem Blight: Soybean
nan
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Diaporthales
Diaporthaceae
Diaporthe
caulivora
nan
Species
nan
k__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Diaporthales;f__Diaporthaceae;g__Diaporthe;s__Diaporthe caulivora
nan
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (1 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Glycine max | Host |
Quarantine Status (42 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Austria | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Belgium | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Bulgaria | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Bahrain | A1 list | 2003 |
| Switzerland | Regulated non-quarantine pest | 2019 |
| China | Quarantine pests | 2021 |
| Cyprus | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Czechia | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Germany | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
| Denmark | RNQP ((EU) 2019/2072 Annex IV) | 2019 |
Distribution (11 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Argentina | Present | — |
| Austria | Present | — |
| Bulgaria | Present | — |
| Canada | Present | |
| Ecuador | Present | — |
| Spain | Absent | — |
| France | Present | — |
| Italy | Present | — |
| Russian Federation | Present | |
| United States of America | Present |
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_023703485.1 | Contig | 57 | 8708 | 8708 | - |
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ASM2370348v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR14071095 | - | - | - | 23363953 | not applicable | |
|
PRJNA717275 SRX10445401 SRP312178 fungi Genomic and transcriptomic basis of Diaporthe caulivora pathogenicity towards soybean plants Dc_8h_3_1 Diaporthe {'host': 'Glycine max', 'title': 'Genomic and transcriptomic basis of Diaporthe caulivora pathogenicity towards soybean plants', 'strain': 'Diaporthe', 'filetype': 'fastq', 'platform': 'ILLUMINA', 'biosamplemodel': 'MIGS/MIMS/MIMARKS.host-associated', 'library_source': 'TRANSCRIPTOMIC', 'instrument_model': 'NextSeq 510', 'library_strategy': 'RNA-Seq', 'library_selection': 'other'} |
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| SRR14071094 | - | - | - | 25821412 | not applicable | |
|
PRJNA717275 SRX10445402 SRP312178 fungi Genomic and transcriptomic basis of Diaporthe caulivora pathogenicity towards soybean plants Dc_48h_1_1 Diaporthe {'host': 'Glycine max', 'title': 'Genomic and transcriptomic basis of Diaporthe caulivora pathogenicity towards soybean plants', 'strain': 'Diaporthe', 'filetype': 'fastq', 'platform': 'ILLUMINA', 'biosamplemodel': 'MIGS/MIMS/MIMARKS.host-associated', 'library_source': 'TRANSCRIPTOMIC', 'instrument_model': 'NextSeq 512', 'library_strategy': 'RNA-Seq', 'library_selection': 'other'} |
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| SRR14071093 | - | - | - | 20819583 | not applicable | |
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PRJNA717275 SRX10445403 SRP312178 fungi Genomic and transcriptomic basis of Diaporthe caulivora pathogenicity towards soybean plants Dc_48h_2_1 Diaporthe {'host': 'Glycine max', 'title': 'Genomic and transcriptomic basis of Diaporthe caulivora pathogenicity towards soybean plants', 'strain': 'Diaporthe', 'filetype': 'fastq', 'platform': 'ILLUMINA', 'biosamplemodel': 'MIGS/MIMS/MIMARKS.host-associated', 'library_source': 'TRANSCRIPTOMIC', 'instrument_model': 'NextSeq 514', 'library_strategy': 'RNA-Seq', 'library_selection': 'other'} |
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Literature
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