Erwinia pyrifoliae
TaxID: 79967
Basic Information
Erwinia pyrifoliae
Asian Pear Blight
Erwinia pyrifoliae is a Gram-negative bacterium and a phytopathogen of Asian pear trees (Pyrus pyrifolia), causing necrotic disease. Its type strain is Ep16/96T(=CFBP 4172T =DSM 12163T.
from Wikipedia
Taxonomic Information
Bacteria
Pseudomonadota
Gammaproteobacteria
Enterobacterales
Erwiniaceae
Erwinia
pyrifoliae
Unclassified
Species
nan
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia pyrifoliae
nan
Prokaryotes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (3 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Fragaria x ananassa | Host |
| Malus domestica | Host |
| Pyrus pyrifolia | Host |
Quarantine Status (3 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (4 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Canada | Present | |
| Republic of Korea | Present | — |
| Netherlands | Present | — |
| United States of America | Present |
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_002952315.1 | Complete Genome | 4 | 4027 | 4027 | - |
|
|
|
ASM295231v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR36442273 | - | - | - | 36619420 | - | |
|
PRJNA1380985 SRX31467136 SRP655034 Erwinia pyrifoliae RNA-Seq control normal rep1 RNA was extracted from Erwinia pyrifoliae culturesnormal cell YKB12327 {'strain': 'YKB12327', 'replicate': "replicate=biological 1'", 'timepoint': '0h', 'isolate id': 'Control-1', 'collected_by': 'National Institute of Agricultural Sciences', 'geo_loc_name': 'South Korea', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2015-06-11', 'isolation_source': 'Malus domestica'} |
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| SRR36442272 | - | - | - | 33728220 | - | |
|
PRJNA1380985 SRX31467137 SRP655034 Erwinia pyrifoliae RNA-Seq control normal rep2 RNA was extracted from Erwinia pyrifoliae culturesnormal cell YKB12327 {'strain': 'YKB12327', 'replicate': "replicate=biological 2'", 'timepoint': '0h', 'isolate id': 'Control-2', 'collected_by': 'National Institute of Agricultural Sciences', 'geo_loc_name': 'South Korea', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2015-06-11', 'isolation_source': 'Malus domestica'} |
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| SRR36442271 | - | - | - | 37899279 | - | |
|
PRJNA1380985 SRX31467138 SRP655034 Erwinia pyrifoliae RNA-Seq control normal rep3 RNA was extracted from Erwinia pyrifoliae culturesnormal cell YKB12327 {'strain': 'YKB12327', 'replicate': "replicate=biological 3'", 'timepoint': '0h', 'isolate id': 'Control-3', 'collected_by': 'National Institute of Agricultural Sciences', 'geo_loc_name': 'South Korea', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2015-06-11', 'isolation_source': 'Malus domestica'} |
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Literature
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