Globisporangium splendens
TaxID: 82926
Basic Information
Globisporangium splendens
Fungus
nan
from Wikipedia
Taxonomic Information
Eukaryota
Oomycota
Peronosporomycetes
Pythiales
Pythiaceae
Globisporangium
splendens
nan
Species
nan
k__Eukaryota;p__Oomycota;c__Peronosporomycetes;o__Pythiales;f__Pythiaceae;g__Globisporangium;s__Globisporangium splendens
nan
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (7 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (7 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Present | — |
| Belgium | Present | — |
| United Kingdom | Present | — |
| Japan | Present | — |
| Oman | Present | — |
| Papua New Guinea | Present | — |
| United States of America | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_006386115.1 | Scaffold | 53 | 342 | 429 | - |
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DCB_P.spl |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR645938 | thallus | - | - | 6172287 | - | |
|
PRJNA185420 SRX215460 SRP017802 general GSM1060481: 144 h fermentation 6-1; Pythium splendens; RNA-Seq {'tissue': 'thallus', 'product': 'lipid', 'sample type': 'filamentous fungi', 'source_name': 'thallus', 'fermentation stage': '144 h'} |
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| SRR10272885 | - | - | - | 19085372 | India: Kerala | |
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PRJNA576573 SRX6986095 SRP225464 general P_splendens_RNAseq The whole RNA was extracted using mirVana RNA isolation kit as per the manufacturers description. Total RNA extracted from the two samples i.e Pythium splendens mycelium & Pythium splendens from infected Piper nigrum by RNA extraction method. The quality of RNA from the samples was measured using Agilent 2100 Bioanalyzer and the quantity was measured by using Nanodrop. The samples having RNA integrity number (RIN) passing value of 8.0 was further used for sequencing. mycelium {'strain': 'rgcb-1', 'isolate': 'mycelium', 'sample_type': 'monoisolate', 'geo_loc_name': 'India: Kerala', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2018-08-05', 'isolation_source': 'pure culture'} |
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| SRR10272884 | - | - | - | 14394918 | India: Kerala | |
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PRJNA576573 SRX6986096 SRP225464 general P_splendens_P_nigrum_RNAseq The whole RNA was extracted using mirVana RNA isolation kit as per the manufacturers description. Total RNA extracted from the two samples i.e Pythium splendens mycelium & Pythium splendens from infected Piper nigrum by RNA extraction method. The quality of RNA from the samples was measured using Agilent 2100 Bioanalyzer and the quantity was measured by using Nanodrop. The samples having RNA integrity number (RIN) passing value of 8.0 was further used for sequencing. infected black pepper plant {'host': 'Piper nigrum L', 'strain': 'rgcb-1', 'isolate': 'infected black pepper plant', 'sample_type': 'monoisolate', 'geo_loc_name': 'India: Kerala', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2018-08-05'} |
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Literature
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