Cronartium ribicola
TaxID: 27354
Basic Information
Cronartium ribicola
White Pine Blister Rust
Cronartium ribicola is a species of rust fungus in the family Cronartiaceae that causes the disease white pine blister rust. Other names include: Rouille v siculeuse du pin blanc (French), white pine Blasenrost (German), moho ampolla del pino blanco (Spanish).
from Wikipedia
Taxonomic Information
Eukaryota
Basidiomycota
Pucciniomycetes
Pucciniales
Coleosporiaceae
Cronartium
ribicola
Undefined
Species
nan
d__Eukaryota;p__Basidiomycota;c__Pucciniomycetes;o__Pucciniales;f__Coleosporiaceae;g__Cronartium;s__Cronartium ribicola
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (28 host plants)
Data sources: EPPO Global Database and relevant literature.
| Scientific Name | Status |
|---|---|
| Castilleja occidentalis | Host |
| Pedicularis chamissonis | Host |
| Pedicularis resupinata | Host |
| Pedicularis yezoensis | Host |
| Pinus albicaulis | Host |
| Pinus armandii | Host |
| Pinus flexilis | Host |
| Pinus koraiensis | Host |
| Pinus monticola | Host |
| Pinus pumila | Host |
Quarantine Status (41 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Argentina | A1 list | 2019 |
| Austria | Quarantine pest ((EU) 2019/2072 Annex II A) | 2019 |
| Belgium | Unknow | 2019 |
| Bulgaria | Quarantine pest ((EU) 2019/2072 Annex II A) | 2019 |
| Bhutan | Quarantine pests | — |
| Switzerland | A1 list | 2019 |
| Chile | A1 list | 2024 |
| China | Quarantine pests | 2021 |
| Cyprus | Quarantine pest ((EU) 2019/2072 Annex II A) | 2019 |
| Czechia | Quarantine pest ((EU) 2019/2072 Annex II A) | 2019 |
Distribution (46 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Present | — |
| Austria | Present | — |
| Belgium | Present | — |
| Belarus | Present | — |
| Bhutan | Present | — |
| Canada | Present | |
| Switzerland | Present | — |
| Chile | Present | — |
| China | Present | |
| Czechia | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_054790615.1 | Chromosome | 262 | 4179 | 15397 | - | - |
|
|
ASM5479061v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR11101730 | - | - | - | 21356084 | USA: Travis Tyrrell seed orchard , Oregon | |
|
PRJNA222839 SRX7740312 SRP031625 fungi RNA-seq for vcr2 aeciospore Following mRNA separation using an RNA-seq sample preparation kit (Illumina), cDNA libraries were constructed with sample-specific 6-bp nucleotide bar-coding tags for 100-bp PE sequencing. virulent (vcr2) {'host': 'host tree (Tag #79) of Cr2Cr2 x OP progeny', 'strain': 'virulent (vcr2)', 'genotype': 'vcr2', 'replicate': 'biological replicate 1', 'sample_type': 'aeciospore', 'collected_by': 'Douglas P. Savin and Richard A. Sniezko', 'geo_loc_name': 'USA: Travis Tyrrell seed orchard , Oregon', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2014-03-12', 'isolation_source': 'stem canker', 'host_tissue_sampled': 'Stem'} |
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| SRR11101729 | - | - | - | 18266617 | USA: Travis Tyrrell seed orchard , Oregon | |
|
PRJNA222839 SRX7740313 SRP031625 fungi RNA-seq for vcr2 aeciospore Following mRNA separation using an RNA-seq sample preparation kit (Illumina), cDNA libraries were constructed with sample-specific 6-bp nucleotide bar-coding tags for 100-bp PE sequencing. virulent (vcr2) {'host': 'host tree (Tag #451) of Cr2Cr2 x OP progeny', 'strain': 'virulent (vcr2)', 'genotype': 'vcr2', 'replicate': 'biological replicate 2', 'sample_type': 'aeciospore', 'collected_by': 'Douglas P. Savin and Richard A. Sniezko', 'geo_loc_name': 'USA: Travis Tyrrell seed orchard , Oregon', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2014-03-12', 'isolation_source': 'stem canker', 'host_tissue_sampled': 'Stem'} |
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| SRR11101728 | - | - | - | 11494965 | USA: Travis Tyrrell seed orchard , Oregon | |
|
PRJNA222839 SRX7740314 SRP031625 fungi RNA-seq for vcr2 aeciospore Following mRNA separation using an RNA-seq sample preparation kit (Illumina), cDNA libraries were constructed with sample-specific 6-bp nucleotide bar-coding tags for 100-bp PE sequencing. virulent (vcr2) {'host': 'host tree (Tag#91) of Cr2Cr2 x OP progeny', 'strain': 'virulent (vcr2)', 'genotype': 'vcr2', 'replicate': 'biological replicate 3', 'sample_type': 'aeciospore', 'collected_by': 'Douglas P. Savin and Richard A. Sniezko', 'geo_loc_name': 'USA: Travis Tyrrell seed orchard , Oregon', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2014-03-12', 'isolation_source': 'stem canker', 'host_tissue_sampled': 'Stem'} |
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Literature
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