Colletotrichum sublineola
TaxID: 1173701
Basic Information
Colletotrichum sublineola
Fungus
Colletotrichum sublineola is a plant pathogen that causes anthracnose in wild rice and sorghum Colletotrichum sublineola (wrongly named for many years as Colletotrichum sublineolum), is the causal agent of sorghum anthracnose, which is one of the most important diseases in sorghum and can cause losses up to 25%.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Glomerellales
Glomerellaceae
Colletotrichum
sublineola
nan
Species
nan
k__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Glomerellales;f__Glomerellaceae;g__Colletotrichum;s__Colletotrichum sublineola
nan
Fungal organisms
Photos (5 photos)
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (3 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (6 countries)
Data Sources: EPPO Global Database and GBIF.
| Country | Status | State |
|---|---|---|
| Australia | Present | — |
| China | Present | — |
| India | Present | — |
| Republic of Korea | Present | — |
| Mexico | Present | — |
| United States of America | Present | — |
Distribution Map (Latitude and longitude coordinates sourced from GBIF.)
Download CSVGenomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_000696135.1 | Scaffold | 46 | 13 | 70 | - |
|
|
|
ASM69613v1 |
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Transcriptomes (5 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR31657940 | - | - | - | 20941994 | - | |
|
PRJNA1195943 SRX27020835 SRP550393 Control-2 fungus not collected {'isolate': 'not collected', 'sample_type': 'fungus', 'geo_loc_name': 'not collected', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-03-03', 'isolation_source': 'not collected'} |
||||||
| SRR31657939 | - | - | - | 23059172 | - | |
|
PRJNA1195943 SRX27020836 SRP550393 Control-3 fungus not collected {'isolate': 'not collected', 'sample_type': 'fungus', 'geo_loc_name': 'not collected', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-03-04', 'isolation_source': 'not collected'} |
||||||
| SRR31657937 | - | - | - | 21887896 | not collected | |
|
PRJNA1195943 SRX27020838 SRP550393 fungi Test-04-2 fungus not collected {'isolate': 'not collected', 'sample_type': 'fungus', 'geo_loc_name': 'not collected', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-03-06', 'isolation_source': 'not collected'} |
||||||
| SRR31657936 | - | - | - | 23663661 | not collected | |
|
PRJNA1195943 SRX27020839 SRP550393 fungi Test-04-3 fungus not collected {'isolate': 'not collected', 'sample_type': 'fungus', 'geo_loc_name': 'not collected', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-03-07', 'isolation_source': 'not collected'} |
||||||
| SRR31657941 | - | - | - | 22026880 | not collected | |
|
PRJNA1195943 SRX27020834 SRP550393 fungi Control-1 fungus not collected {'isolate': 'not collected', 'sample_type': 'fungus', 'geo_loc_name': 'not collected', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2024-03-02', 'isolation_source': 'not collected'} |
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DNA Barcodes (12 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| GBGLO788-13 | - | ITS | 574 | - | - | - | |
| GBGLO317-13 | - | ITS | 410 | - | - | - | |
| GBGLO316-13 | - | ITS | 416 | - | - | - | |
| GBGLO209-13 | - | ITS | 505 | - | - | - | |
| GBGLO2089-13 | - | ITS | 549 | - | - | - | |
| GBGLO208-13 | - | ITS | 549 | - | - | - | |
| GBGLO207-13 | - | ITS | 548 | - | - | - | |
| GBGLO206-13 | - | ITS | 505 | - | - | - | |
| GBGLO205-13 | - | ITS | 473 | - | - | - | |
| GBGLO1888-13 | - | ITS | 569 | Mexico | - | 25.307297, -99.59611 |
Literature
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Failed to fetch literature