Nematoda
TaxID: 6231
Basic Information
Nematoda
-
The nematodes ( NEM-ə-tohdz or NEEM-; Ancient Greek: Νηματώδη; Latin: Nematoda), roundworms or eelworms constitute the phylum Nematoda. Species in the phylum inhabit a broad range of environments. Most species are free-living, feeding on microorganisms, but many are parasitic. Parasitic worms (helminths) are the cause of soil-transmitted helminthiases. They are classified along with arthropods, tardigrades and other moulting animals in the clade Ecdysozoa. Unlike the flatworms, nematodes have a tubular digestive system, with openings at both ends. Like tardigrades, they have a reduced number of Hox genes, but their sister phylum Nematomorpha has kept the ancestral protostome Hox genotype, which shows that the reduction has occurred within the nematode phylum. Nematode species can be difficult to distinguish from one another. Consequently, estimates of the number of nematode species are uncertain. A 2013 survey of animal biodiversity suggested there are over 25,000. Estimates of the total number of extant species are subject to even greater variation. A widely referenced 1993 article estimated there might be over a million species of nematode. A subsequent publication challenged this claim, estimating the figure to be at least 40,000 species. Although the highest estimates (up to 100 million species) have since been deprecated, estimates supported by rarefaction curves, together with the use of DNA barcoding and the increasing acknowledgment of widespread cryptic species among nematodes, have placed the figure closer to one million species. Nematodes have successfully adapted to nearly every ecosystem: from marine (salt) to fresh water, soils, from the polar regions to the tropics, as well as the highest to the lowest of elevations. They are ubiquitous in freshwater, marine, and terrestrial environments, where they often outnumber other animals in both individual and species counts, and are found in locations as diverse as mountains, deserts, and oceanic trenches. They are found in every part of the Earth's lithosphere, even at great depths, 0.9–3.6 km (3,000–12,000 ft) below the surface of the Earth in gold mines in South Africa. They represent 90% of all animals on the ocean floor. In total, 4.4 × 1020 nematodes inhabit the Earth's topsoil, or approximately 60 billion for each human, with the highest densities observed in tundra and boreal forests. Their numerical dominance, often exceeding a million individuals per square meter and accounting for about 80% of all individual animals on Earth, their diversity of lifecycles, and their presence at various trophic levels point to an important role in many ecosystems. They play crucial roles in polar ecosystems. The roughly 2,271 genera are placed in 256 families. The many parasitic forms include pathogens in most plants and animals. A third of the genera occur as parasites of vertebrates; about 35 nematode species are human parasites.
from Wikipedia
Taxonomic Information
Eukaryota
Nematoda
unclassified
unclassified
unclassified
unclassified
unclassified
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Phylum
k__Eukaryota;p__Nematoda;c__unclassified;o__unclassified;f__unclassified;g__unclassified;s__unclassified
Nematodes
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| United States of America | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (0 records)
Data source: NCBI.
No genome records available.
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR39879743 | Whole | - | hermaphrodite | 34615856 | USA: Nevada | |
|
PRJNA1503572 SRX34551172 SRP722142 general day-1 kin-29 hermaphrodite replicate3 total RNA-Seq from Day-1 old C. elegans Py1476 {'age': 'Day 1', 'sex': 'hermaphrodite', 'strain': 'Py1476', 'tissue': 'Whole', 'geo_loc_name': 'USA: Nevada', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2022-04-15'} |
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| SRR39879742 | Whole | - | hermaphrodite | 35868241 | USA: Nevada | |
|
PRJNA1503572 SRX34551173 SRP722142 general day-1 kin-29 hermaphrodite replicate4 total RNA-Seq from Day-1 old C. elegans Py1476 {'age': 'Day 1', 'sex': 'hermaphrodite', 'strain': 'Py1476', 'tissue': 'Whole', 'geo_loc_name': 'USA: Nevada', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2022-04-01'} |
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| SRR39879741 | Whole | - | hermaphrodite | 38179566 | USA: Nevada | |
|
PRJNA1503572 SRX34551174 SRP722142 general day-1 kin-29 hermaphrodite replicate5 total RNA-Seq from Day-1 old C. elegans Py1476 {'age': 'Day 1', 'sex': 'hermaphrodite', 'strain': 'Py1476', 'tissue': 'Whole', 'geo_loc_name': 'USA: Nevada', 'biosamplemodel': 'Model organism or animal', 'collection_date': '2022-04-02'} |
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DNA Barcodes (20329 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| HELMB009-24 | - | 16S | 216 | Argentina | 2023-06-21 | - | |
| HELMB008-24 | BOLD:AEH6654 | ITS1 | 401 | Argentina | 2023-06-21 | - | |
| HELMB008-24 | BOLD:AEH6654 | COI-5P | 425 | Argentina | 2023-06-21 | - | |
| HELMB008-24 | BOLD:AEH6654 | 16S | 226 | Argentina | 2023-06-21 | - | |
| HELMB007-24 | - | ITS1 | 534 | Argentina | 2024-02-20 | - | |
| HELMB007-24 | - | 16S | 214 | Argentina | 2024-02-20 | - | |
| GBNEM9491-23 | - | 18S-5P | 401 | - | - | - | |
| GBNEM9490-23 | - | 18S-5P | 402 | - | - | - | |
| GBNEM949-23 | - | 18S-5P | 719 | India | - | - | |
| GBNEM9489-23 | - | 18S-5P | 401 | - | - | - |
Literature
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