Apodemus flavicollis
TaxID: 54292
Basic Information
Apodemus flavicollis
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The yellow-necked mouse (Apodemus flavicollis), also called yellow-necked field mouse or yellow-necked wood mouse, is closely related to the wood mouse, with which it was long confused. It was only recognised as a separate species in 1894. It differs in its band of yellow fur around the neck and in having slightly larger ears and usually being slightly larger overall. Around 100 mm in length, it can climb trees and sometimes overwinters in houses. It is found mostly in mountainous areas of southern Europe, but extends north into parts of Scandinavia and Britain. It facilitates the spread of tick-borne encephalitis to humans and is a reservoir species for the Dobrava virus, a hantavirus that is responsible for causing haemorrhagic fever with renal syndrome.
from Wikipedia
Taxonomic Information
Eukaryota
Chordata
Mammalia
Rodentia
Muridae
Apodemus
Apodemus flavicollis
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Species
k__Eukaryota;p__Chordata;c__Mammalia;o__Rodentia;f__Muridae;g__Apodemus;s__Apodemus flavicollis
Vertebrates
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Moldova | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (0 records)
Data source: NCBI.
No genome records available.
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR9990591 | spleen | adult | male | 33110324 | N/A | |
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PRJNA556160 SRX6730006 SRP218649 general RNA-Seq of Apodemus flavicollis: spleen tissue Total RNA was extracted from RNA-Later stored sample using QIAGEN RNeasy Mini Kit. RNA libraries were prepared using TruSeq Stranded mRNA Library Prep Kit and Poly(A) selection. Samples were sequenced on HiSeq2500 with a 2x126 setup. 2016105 {'sex': 'male', 'breed': 'wildtype', 'tissue': 'spleen', 'isolate': '2016105', 'dev_stage': 'adult', 'biosamplemodel': 'Model organism or animal'} |
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| SRR9990590 | spleen | adult | male | 36023073 | N/A | |
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PRJNA556160 SRX6730007 SRP218649 general RNA-Seq of Apodemus flavicollis: spleen tissue Total RNA was extracted from RNA-Later stored sample using QIAGEN RNeasy Mini Kit. RNA libraries were prepared using TruSeq Stranded mRNA Library Prep Kit and Poly(A) selection. Samples were sequenced on HiSeq2500 with a 2x126 setup. 2016104 {'sex': 'male', 'breed': 'wildtype', 'tissue': 'spleen', 'isolate': '2016104', 'dev_stage': 'adult', 'biosamplemodel': 'Model organism or animal'} |
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| SRR25732172 | - | - | - | 1 | Germany | |
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PRJNA1007609 SRX21455789 SRP456458 general Parasitization and diet of Nyctereutes procyonoides Microsynth Nyctereutes procyonoides {'strain': 'Chordata', 'isolate': 'Nyctereutes procyonoides', 'geo_loc_name': 'Germany', 'biosamplemodel': 'MIGS.eu', 'collection_date': '2020/2023', 'env_broad_scale': 'Stomach Nyctereutes procyonoides', 'isol_growth_condt': 'not collected'} |
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Literature
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