Stuckenia pectinata
TaxID: 55444
Basic Information
Stuckenia pectinata
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Stuckenia pectinata (syn. Potamogeton pectinatus), commonly called sago pondweed or fennel pondweed, and sometimes called ribbon weed, is a cosmopolitan water plant species that grows in fresh and brackish water on all continents except Antarctica.
from Wikipedia
Taxonomic Information
Eukaryota
Streptophyta
Magnoliopsida
Alismatales
Potamogetonaceae
Stuckenia
Stuckenia pectinata
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Species
k__Eukaryota;p__Streptophyta;c__Magnoliopsida;o__Alismatales;f__Potamogetonaceae;g__Stuckenia;s__Stuckenia pectinata
Weeds
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Indonesia | Absent | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_976940475.1 | Scaffold | 668 | 6285 | 11814 | - |
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laStuPect1.hap2.1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR25068787 | leaf | flowering | - | 30425465 | China: Tibet | |
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PRJNA926376 SRX20822890 SRP418647 weed RNA_Seq of Batrachium bungei: young fresh leaf Total RNA was separately extracted from young leaves of each individual using the QIAGEN RNeasy Plant Mini Kit (QIAGEN, Germany). RNA samples were then treated with DNaseI and purified using Dynabeads Oligo (dT)25 (Life Technologies, Carlsbad, CA, USA) and 150-bp PE libraries were constructed following the manufacturers instructions for the NEBNext Ultra TM RNA Library Prep Kit for Illumina (NEB, Ipswich, MA, USA). The generated cDNA libraries were amplified using the TruSeq PE Cluster kit (Illumina, San Diego, CA, USA) and sequenced on the HiSeq4040 platform at Majorbio Bio-Tech (Shanghai, China). LWS_1 {'tissue': 'leaf', 'ecotype': 'LWS', 'isolate': 'LWS_1', 'dev_stage': 'flowering', 'geo_loc_name': 'China: Tibet', 'biosamplemodel': 'Plant', 'collection_date': '2020-09'} |
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| SRR25068786 | leaf | flowering | - | 21344904 | China: Tibet | |
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PRJNA926376 SRX20822891 SRP418647 weed RNA_Seq of Batrachium bungei: young fresh leaf Total RNA was separately extracted from young leaves of each individual using the QIAGEN RNeasy Plant Mini Kit (QIAGEN, Germany). RNA samples were then treated with DNaseI and purified using Dynabeads Oligo (dT)25 (Life Technologies, Carlsbad, CA, USA) and 150-bp PE libraries were constructed following the manufacturers instructions for the NEBNext Ultra TM RNA Library Prep Kit for Illumina (NEB, Ipswich, MA, USA). The generated cDNA libraries were amplified using the TruSeq PE Cluster kit (Illumina, San Diego, CA, USA) and sequenced on the HiSeq4041 platform at Majorbio Bio-Tech (Shanghai, China). LWS_2 {'tissue': 'leaf', 'ecotype': 'LWS', 'isolate': 'LWS_2', 'dev_stage': 'flowering', 'geo_loc_name': 'China: Tibet', 'biosamplemodel': 'Plant', 'collection_date': '2020-09'} |
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| SRR25068785 | leaf | flowering | - | 24743698 | China: Tibet | |
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PRJNA926376 SRX20822892 SRP418647 weed RNA_Seq of Batrachium bungei: young fresh leaf Total RNA was separately extracted from young leaves of each individual using the QIAGEN RNeasy Plant Mini Kit (QIAGEN, Germany). RNA samples were then treated with DNaseI and purified using Dynabeads Oligo (dT)25 (Life Technologies, Carlsbad, CA, USA) and 150-bp PE libraries were constructed following the manufacturers instructions for the NEBNext Ultra TM RNA Library Prep Kit for Illumina (NEB, Ipswich, MA, USA). The generated cDNA libraries were amplified using the TruSeq PE Cluster kit (Illumina, San Diego, CA, USA) and sequenced on the HiSeq4042 platform at Majorbio Bio-Tech (Shanghai, China). LWS_3 {'tissue': 'leaf', 'ecotype': 'LWS', 'isolate': 'LWS_3', 'dev_stage': 'flowering', 'geo_loc_name': 'China: Tibet', 'biosamplemodel': 'Plant', 'collection_date': '2020-09'} |
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Literature
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