Cotton leafroll dwarf virus
TaxID: 312295
Basic Information
Cotton leafroll dwarf virus
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Taxonomic Information
unclassified
Pisuviricota
Pisoniviricetes
Sobelivirales
Solemoviridae
Polerovirus
Polerovirus CLDV
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No Rank
k__unclassified;p__Pisuviricota;c__Pisoniviricetes;o__Sobelivirales;f__Solemoviridae;g__Polerovirus;s__Polerovirus CLDV
Viruses/Viroids
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (2 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Thailand | Quarantine pests | — |
| United States of America | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_000890175.1 | Complete Genome | - | 5 | 5 | - |
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ViralProj53497 |
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Transcriptomes (2 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR10765499 | Leaf | after flowering | - | 21877261 | USA | |
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PRJNA597539 SRX7439417 SRP238736 virus Cotton True-seq CS4 {'tissue': 'Leaf', 'disease': 'Cotton leafroll dwarf disease', 'isolate': 'CS4', 'dev_stage': 'after flowering', 'collected_by': 'Akhtar Ali', 'geo_loc_name': 'USA', 'biosamplemodel': 'Viral', 'collection_date': '2019-08-15'} |
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| SRR18840566 | - | - | - | 20226213 | USA: Oklahoma | |
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PRJNA597539 SRX14938493 SRP238736 virus CLRDV Total RNA was subjected to high-throughput sequencing (HTS) on the NextSeq 500/550 high-output kit v2.5 (Illumina, USA) EC4 {'host': 'Cotton', 'isolate': 'EC4', 'collected_by': 'Akhtar Ali', 'geo_loc_name': 'USA: Oklahoma', 'biosamplemodel': 'Viral', 'collection_date': '2021-10-10', 'isolation_source': 'cotton leaves'} |
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Literature
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