Xylaria hypoxylon

TaxID: 37992

Basic Information

Scientific Name *

Xylaria hypoxylon

Common Name

-

Introduction

Xylaria hypoxylon is a species of bioluminescent fungus in the family Xylariaceae. It is known by a variety of common names, such as the candlestick fungus, the candlesnuff fungus, carbon antlers, or the stag's horn fungus. The fruit bodies, characterized by erect, elongated black branches with whitened tips, typically grow in clusters on decaying hardwood. The fungus can cause a root rot in hawthorn and gooseberry plants.

from Wikipedia

Taxonomic Information

Domain/Kingdom

Eukaryota

Phylum

Ascomycota

Class

Sordariomycetes

Order

Xylariales

Family

Xylariaceae

Genus

Xylaria

Species

Xylaria hypoxylon

Subspecies

-

Photos (0 photos)

No photos available.

Morphological Features

No morphological description available.

Host Plants (0 host plants)

Data sources: EPPO Global Database and relevant literature.

No host plants available.

Quarantine Status (2 records)

Data sources: IPPC website and national quarantine websites; verified by human review.

Country	Status	Year Added
India	Quarantine pests	—
Sudan	Quarantine pests	—

Distribution (0 countries)

Data Sources: EPPO Global Database and GBIF.

0

Present

0

Absent

0

Unknown/Other

No distribution records available.

Genomes (1 records)

Data source: NCBI.

Assembly Accession	Assembly Level	Genome Size(Mb)	Contig N50(Kb)	Scaffold N50(Kb)	BUSCO%	Downloads	Actions
GCA_004768795.1	Scaffold	42	122	122	-	FASTA GFF3
Assembly Name ASM476879v1

Transcriptomes (3 records)

Data source: NCBI.

Run ID	Tissue	Developmental Stage	Sex	Read Count	Location	Actions
SRR6232558	-	-	-	31822507	missing	Download NCBI
BioProject PRJNA407522 Experiment ID SRX3340994 Study ID SRP122606 Category fungi Title Xylaria hypoxylon OSC100004 Gene Expression Profiling Strain OSC100004 Sample Attributes {'strain': 'OSC100004', 'biosamplemodel': 'MIGS.eu'}
SRR6232557	-	-	-	24685451	missing	Download NCBI
BioProject PRJNA407523 Experiment ID SRX3340995 Study ID SRP122608 Category fungi Title Xylaria hypoxylon OSC100004 Gene Expression Profiling Strain OSC100004 Sample Attributes {'strain': 'OSC100004', 'biosamplemodel': 'MIGS.eu'}
SRR6232556	-	-	-	19259700	missing	Download NCBI
BioProject PRJNA407524 Experiment ID SRX3340996 Study ID SRP122607 Category fungi Title Xylaria hypoxylon OSC100004 Gene Expression Profiling Strain OSC100004 Sample Attributes {'strain': 'OSC100004', 'biosamplemodel': 'MIGS.eu'}

DNA Barcodes (60 records)

View all

Data source: BOLD.

Process ID	BIN	Marker	Length	Country	Date	Lat/Lon	Sequence
TRIHF143-22	-	ITS	408	Colombia	2021-11-05	3.067, -75.381	GCTTCGGCAGGTCAGGACCTACCCGGGAAGACTTACCCTGTAGGTGCATCCTGCCGGTGGCTTATTGAACTCTGGTTATTGTATGGCATTCTGAATAAAGATGAAAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAACTTCAGTGAATCATCGAATTTTTGAACGCATATTGCGCCCACTAGTATTCTAATGGGCATGCCTGTTCGAGCGTCATTTCAACCCCTTAAGCCTCTGTTGCTTAGTGTTGGGAGCCTACAGTGATGTAGCTCTTTAAAGGTAGTGGCGGAGTCGTCTTACCCTATAGATGTAGTAAAATAGTTTATCTCGCCTATAGATGAGTCGGTCTCTCGC
TRIHF137-22	-	ITS	314	Colombia	2021-11-03	3.066, -75.376	GGCATTCTGAATAAAGATGAAAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAACTTCAGTGAATCATCGAATTTTTGAACGCATATTGCGCCCACTAGTATTCTAATGGGCATGCCTGTTCGAGCGTCATTTCAACCCCTTAAGCCTCTGTTGCTTAGTGTTGGGAGCCTACAGTGATGTAGCTCTTTAAAGGTAGTGGCGGAGTCGTCTTACCCTATAGATGTAGTAAAATAGTTTATCTCGCCTATAGATGAGTC
NOBAS3908-17	-	ITS	581	Norway	2012-10-09	58.993767, 9.74719	aagtcgtaacaaggtctccgttggtgaaccagcggagggatcattaaagagttaattacaactcccaaacccatgtgaacttaccttctgttgcctcggcaggtcgtgtttaccctgtgaggtcctaccctataggactctacctggtagacacgggtacgcctgccggtggcccatgaaactctgttaattctatgttattctgaatctataactaaataagttaaaactttcaacaacggatctcttggttctggcatcgatgaagaacgcagcgaaatgcgataagtaatgtgaattgcagaattcagtgaatcatcgaatctttgaacgcacattgcgcccattagtattctagtgggcatgcctgttcgagcgtcatttcaacccttaagcccctgttgcttagcgttgggagcctacagccttctgtagctccccaaagttagtggcggagtcggttcacactctagacgtagtagattctatctcgtctgtagtgaggccggtcccctgccgtaaaacccccctaatttttaaaggttgacctcggatcaggtaggaatacccgctgaacttaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GBXYL948-13	-	ITS	1223	Mexico	-	23.874361, -101.554	GTCTCCGTTGGTGAACCAGCGGAGGGATCATTAAAGAGTGTAATAAAACTCCTAAACCCCTGTGAACTTATATTGGTTTGACGCAGCAGATAGCGTCTACCTCGCGGGCTCCTACCTTGGTAGGAGCTTGCAAGGTGGGCGCAGGTCTGTTTTTCCATATTCGTAAGGCTCTCTCTTTTATTAGAGAGCGGTCTGCGCAGTGGACGCAGTTAGTTACTTACGTTGCGACATCGCAAGCGTTATTGTACAAATACTGTGGAGGTCACATAAACCTGTTTACTGTTATAATCTGAAATATATAAAACAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAGTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCCCTGTTGCTTAGCGTTGGGAGCCTACAGCCTGCTGTAGCTCCTTAAAGATAGTGGCGGAGTCGGTTCACACTCTAGACGTAGTAAAATCTTTATCTCGCCTATAGATGAGCCGGCGCCTTGCCGTAAAACCCCTACTCTTTCACAAGGTTGACCTCGGATCTGTAGGAATACCCGCTGAACTTACAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCCTTCGGGTCCGAGTTGTAATTTGCAGAGGATGCTTTGGGCGCGGTGCCTTCCGAGTTCCCTGGAACGGAACGCCTTAGAGGGTGAGAGCCCCGTACGGTTGGACACCAAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAGGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTTGCGACCAGACCTTTTCCCAGCGGATCATCCGGTGTTCTCACCGGTGCACTTCGCTGGGTTGAGGCCAGCATCGGTTTCCGCAGGGGGATAAAAGCCCGGGGAACGTAGCTCCCTCGGGAGTGTTATAGCCCCTCGCATAATACCCTTGCGGGGACCGAGGACCGCACTTCGGCAAGGATGCTGGCGTAATGGTCGTCAACGA
GBXYL401-13	-	ITS	510	-	-	-	CATTAAAGAGTTAATTACAACTCCCAAACCCATGTGAACTTACCTTCTGTTGCCTCGGCAGGTCGTGTTTACCCTGTGAGGTTCTACCCTGTAGGACCCTACCTGGTAGACACGGGTACGCCTGCCGGTGGCCCATGAAACTCTGTTAATTCTATGTTATTCTGAATCTATAACTAAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCCCTGTTGCTTAGCGTTGGGAGCCTACAGCCTTCTGTAGCTCCCCAAAGTTAGTGGCGGAGTCGGTTCCCACTCTAGACGTAGTAGATTCTATCTCGTCTGTAGTGAGGCCGGTCCCCTGCCGTAAAACCCCCCTAATTTTTAAAGGTTGACCTC
GBXYL400-13	-	ITS	510	-	-	-	CATTAAAGAGTTAATTACAACTCCCAAACCCATGTGAACTTACCTTCTGTTGCCTCGGCAGGTCGTGTTTACCCTGTGAGGTTCTACCCTGTAGGACCCTACCTGGTAGACACGGGTACGCCTGCCGGTGGCCCATGAAACTCTGTTAATTCTATGTTATTCTGAATCTATAACTAAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCCCTGTTGCTTAGCGTTGGGAGCCTACAGCCTTCTGTAGCTCCCCAAAGTTAGTGGCGGAGTCGGTTCCCACTCTAGACGTAGTAGATTCTATCTCGTCTGTAGTGAGGCCGGTCCCCTGCCGTAAAACCCCCCTAATTTTTAAAGGTTGACCTC
GBXYL399-13	-	ITS	519	-	-	-	CATTAAAGAGTTTTATAACTCCCAAACCCATGTGAACATACCGTACGTTGCCTCGGCAGGCTGCATCTCCCTGTGAGGTCCTACCCTGTAGGATGCTACGCTGTAAGGCTTAGCGGGAAGATGCATTAAAGCCTGCCGGCGGCCCATTAAACTCTGTTTATTTTTGAAATTCTGAGGCTATAATAAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCACTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCCCTGTTGCTTAGTGTTGGGAGCCTACGGTCAGCGTAGCTCCTCAAATGTAGTGGCGGAGTTGGTTCACACTCTAGACGTAGTAATTTTTATCTCGCCTGTGAGTTGGACCGGTCCCTCGCCGTAAAACCCCCAAAAATTTTAAAGGTTGACCTC
GBXYL2294-15	-	ITS	510	Puerto Rico	-	18.216225, -66.494255	GATCATTAAAGAGTTTTGATAACTCCTAAAACCCATGTGAACTTACCTTCTGTTGCCTCGGCAGGTCGTGTCTACCCTGTGGTCTCCTACCCTGTAGGAGACTACCTGGTGGTCACGGGTCTACCTGTCAGTGGCCCGTTAAACTCTGTTTATTATATGCCATTCTGAATTATCAACTAAATAAGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTTTGTTGCTTAGTGTTGGGAGCCTACGGCCTTCTGTAGCTCCTTAAAGTTAGTGGCAGAGTCGGTTTACACTCTAGACGTAGTAGATTCTATCTCGTCTGTAGTTAGGCCGGTCTCTTGCCGTAAAACCCCCCTAAATTTTTTTTTTTAA
GBXYL2066-14	-	ITS	495	Germany	-	51.083046, 10.426171	AAGAGTTAATTACAACTCCCAAACCCATGTGAACTTACCTTTTGTTGCCTCGGCAGGTCGTGTTTACCCTGTGAGGTCCTACCCTGTAGGACCCTACCTGGTAGACACGGGTACGCCTGCCGGTGGCCCATGAAACTCTGTTAATTCTATGTTATTCTGAATCTATAACTAAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCCCTGTTGCTTAGCGTTGGGAGCCTACAGCCTTCTGTAGCTCCCCAAAGTTAGTGGCGGAGTCGGTTCACACTCTAGACGTAGTAGATTCTATCTCGTCTGTAGTGAGGCCGTCCCCTGCCGTAAAACCCCCCTAATTTTTAAAG
GBXYL1217-13	-	ITS	587	Taiwan	2006-08-20	23.697807, 120.96051	TCCGTAGGTGAACCTGCGGAGGGATCATTAAAGAGTTAATTACAACTCCCAAACCCATGTGAACTTACCTTCTGTTGCCTCGGCAGGTCGGGTTTACCCTGTGAGGTGTTACCCTGTAAGACCCTACCTGGTAGACCCGGGTACGCCTGCCGGTGGCCCATGAAACTCTGTTTATTCTATGTTATTCTGAATCTATAAACTAAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCCCTGTTGCTTAGCGTTGGGAGCCTACAGCCTTCTGTAGCTCCCCAAAGTTAGTGGCGGAGTCGGTTTCCACTCTAGACGTAGTAGATTCTATCTCGTCTGTAGTGAGGCCGGTCCCCTGCCGTAAAAACCCCCCTAATTTTAAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAAGCATATCAATAAGCGGAGGA

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Xylaria hypoxylon

Basic Information

Taxonomic Information

Photos (0 photos)

Morphological Features

Host Plants (0 host plants)

Quarantine Status (2 records)

Distribution (0 countries)

Genomes (1 records)

Transcriptomes (3 records)

DNA Barcodes (60 records)

Literature

State Information