Didymella
TaxID: 55170
Basic Information
Didymella
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Didymella is a genus of fungi belonging to the family Didymellaceae. The genus has cosmopolitan distribution.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Dothideomycetes
Pleosporales
Didymellaceae
Didymella
unclassified
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Genus
k__Eukaryota;p__Ascomycota;c__Dothideomycetes;o__Pleosporales;f__Didymellaceae;g__Didymella;s__unclassified
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (2 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| French Polynesia | Quarantine pests | — |
| United States of America | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (0 records)
Data source: NCBI.
No genome records available.
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR35338983 | - | - | - | 23716500 | China: Shiqian County, Guizhou Province | |
|
PRJNA1327302 SRX30439473 SRP619090 fungi Didymella segeticola treated with PCN for 36 hours, with a final concentration of EC70 The mycelium plug (diameter 4 mm) at the edge of CGMCC3.20152 colony 7d was transferred into PDB medium with final concentrations of EC70, and inoculated in an incubator at 25 for 36h. The RNA of the total sample was isolated and purified by TRIzol (thermofisher, 15596018) according to the operation scheme provided by the manufacturer. Then the quantity and purity of total RNA was controlled by NanoDrop ND-1000 (NanoDrop, Wilmington, DE, USA) and the integrity of RNA was detected by Bioanalyzer 2100 (Agilent, CA, USA). The concentration was >50ng/L, RIN value >7.0, and total RNA>4g. Didymella segeticola sample 4 {'strain': 'CGMCC3.20152', 'isolate': 'Didymella segeticola sample 4', 'lat_lon': '27.32 N 107.55 E', 'collected_by': 'Zhuo Chen', 'geo_loc_name': 'China: Shiqian County, Guizhou Province', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2024-11', 'isolation_source': 'Camellia sinensis leaf'} |
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| SRR35338982 | - | - | - | 20639160 | China: Shiqian County, Guizhou Province | |
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PRJNA1327302 SRX30439474 SRP619090 fungi Didymella segeticola treated with PCN for 36 hours, with a final concentration of EC70 The mycelium plug (diameter 4 mm) at the edge of CGMCC3.20152 colony 7d was transferred into PDB medium with final concentrations of EC70, and inoculated in an incubator at 25 for 36h. The RNA of the total sample was isolated and purified by TRIzol (thermofisher, 15596018) according to the operation scheme provided by the manufacturer. Then the quantity and purity of total RNA was controlled by NanoDrop ND-1000 (NanoDrop, Wilmington, DE, USA) and the integrity of RNA was detected by Bioanalyzer 2100 (Agilent, CA, USA). The concentration was >50ng/L, RIN value >7.0, and total RNA>4g. Didymella segeticola sample 5 {'strain': 'CGMCC3.20152', 'isolate': 'Didymella segeticola sample 5', 'lat_lon': '27.32 N 107.55 E', 'collected_by': 'Zhuo Chen', 'geo_loc_name': 'China: Shiqian County, Guizhou Province', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2024-11', 'isolation_source': 'Camellia sinensis leaf'} |
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| SRR35338981 | - | - | - | 20404626 | China: Shiqian County, Guizhou Province | |
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PRJNA1327302 SRX30439475 SRP619090 fungi Didymella segeticola treated with PCN for 36 hours, with a final concentration of EC70 The mycelium plug (diameter 4 mm) at the edge of CGMCC3.20152 colony 7d was transferred into PDB medium with final concentrations of EC70, and inoculated in an incubator at 25 for 36h. The RNA of the total sample was isolated and purified by TRIzol (thermofisher, 15596018) according to the operation scheme provided by the manufacturer. Then the quantity and purity of total RNA was controlled by NanoDrop ND-1000 (NanoDrop, Wilmington, DE, USA) and the integrity of RNA was detected by Bioanalyzer 2100 (Agilent, CA, USA). The concentration was >50ng/L, RIN value >7.0, and total RNA>4g. Didymella segeticola sample 6 {'strain': 'CGMCC3.20152', 'isolate': 'Didymella segeticola sample 6', 'lat_lon': '27.32 N 107.55 E', 'collected_by': 'Zhuo Chen', 'geo_loc_name': 'China: Shiqian County, Guizhou Province', 'biosamplemodel': 'Pathogen.env', 'collection_date': '2024-11', 'isolation_source': 'Camellia sinensis leaf'} |
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DNA Barcodes (65 records)
View allData source: BOLD.
| Process ID | BIN | Marker | Length | Country | Date | Lat/Lon | Sequence |
|---|---|---|---|---|---|---|---|
| NFM090-23 | - | ITS | 538 | Norway | 2022-08-16 | 70.968, -8.683 | |
| NFM090-23 | - | 28S | 855 | Norway | 2022-08-16 | 70.968, -8.683 | |
| NFM090-23 | - | 18S | 1647 | Norway | 2022-08-16 | 70.968, -8.683 | |
| HONZA188-10 | - | ITS | 550 | Mexico | 2010-07-16 | - | |
| GBPLE638-13 | - | ITS | 448 | - | - | - | |
| GBPLE636-13 | - | ITS | 448 | - | - | - | |
| GBPLE4719-15 | - | ITS | 487 | China | - | - | |
| GBPLE4718-15 | - | ITS | 481 | - | - | - | |
| GBPLE4717-15 | - | ITS | 459 | Japan | 2006-07-26 | 36.767387, 137.46935 | |
| GBPLE4704-15 | - | ITS | 449 | Australia | - | - |
Literature
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