Pospiviroid
TaxID: 185753
Basic Information
Pospiviroid
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Pospiviroid is a genus of ssRNA viroids that infects plants, most commonly tubers. It belongs to the family Pospiviroidae. The first viroid discovered was a pospiviroid, the PSTVd species (potato spindle tuber viroid).
from Wikipedia
Taxonomic Information
unclassified
unclassified
unclassified
unclassified
Pospiviroidae
Pospiviroid
unclassified
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Genus
k__unclassified;p__unclassified;c__unclassified;o__unclassified;f__Pospiviroidae;g__Pospiviroid;s__unclassified
Viruses/Viroids
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (2 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (0 records)
Data source: NCBI.
No genome records available.
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| ERR13033953 | - | - | - | 428897 | N/A | |
|
PRJEB75479 ERX12405694 ERP160055 general MinION sequencing SQK-RNA002/R9.4.1 Flowcell. In vitro synthetized circular CEVd RNA, 0% m6A, sample #2. Circularized by T4 RNA Ligase2 and linearized by Zn2+ treatment. PolyA tailed by E.coli polyA polymerase. {'organism': 'Citrus exocortis viroid', 'collection date': '2023', 'scientific_name': 'Citrus exocortis viroid', 'geographic location (country and/or sea)': 'Czechia'} |
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| ERR14058185 | - | - | - | 496265 | N/A | |
|
PRJEB75479 ERX13461188 ERP160055 general MinION sequencing SQK-RNA004/RNA Flowcell. In vitro synthetized circular CEVd RNA, 0% m6A, sample #3. Circularized by T4 RNA Ligase2 and linearized by Zn2+ treatment. PolyA tailed by E.coli polyA polymerase. {'organism': 'Citrus exocortis viroid', 'collection date': '2023', 'scientific_name': 'Citrus exocortis viroid', 'geographic location (country and/or sea)': 'Czechia'} |
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| ERR14058186 | - | - | - | 818021 | N/A | |
|
PRJEB75479 ERX13461189 ERP160055 general MinION sequencing SQK-RNA004/RNA Flowcell. Circular CEVd sample isolated from infected Gynura plant by double-PAGE purification, sample #2. Linearized by Zn2+ treatment. PolyA tailed by E.coli polyA polymerase. {'sample name': 'cCEVD #2', 'insdc status': 'public', 'submitter id': 'cCEVD #2', 'collection date': '2023', 'scientific_name': 'Citrus exocortis viroid', 'ena first public': '2024-01-01', 'insdc center name': 'IOCB', 'geographic location (country and/or sea)': 'Italy'} |
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Literature
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