Sclerotinia trifoliorum
TaxID: 28548
Basic Information
Sclerotinia trifoliorum
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Sclerotinia trifoliorum is a plant pathogen infecting alfalfa, red clover, chickpea, and fava bean. Lithourgidis et al. have done much work on this disease and fava bean.
from Wikipedia
Taxonomic Information
Eukaryota
Ascomycota
Leotiomycetes
Helotiales
Sclerotiniaceae
Sclerotinia
Sclerotinia trifoliorum
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Species
k__Eukaryota;p__Ascomycota;c__Leotiomycetes;o__Helotiales;f__Sclerotiniaceae;g__Sclerotinia;s__Sclerotinia trifoliorum
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (2 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_905066765.1 | Contig | 39 | 2127 | 2127 | - |
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Sctrf_SwB9_genome |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR12867755 | Mycelium from in vitro culture | - | - | 26140524 | N/A | |
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PRJNA670487 SRX9333822 SRP288036 fungi GSM4845075: AOPH-10_SwB9_CAM_1: PDA plate containing 50µM camalexin rep1; Sclerotinia trifoliorum; RNA-Seq SwB9 {'strain': 'SwB9', 'tissue': 'Mycelium from in vitro culture', 'treatment': 'in vitro (Stcam)', 'source_name': '~20mm wide mycelium colony'} |
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| SRR12867756 | Mycelium from in vitro culture | - | - | 28780879 | N/A | |
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PRJNA670487 SRX9333823 SRP288036 fungi GSM4845076: AOPH-11_SwB9_CAM_2: PDA plate containing 50µM camalexin rep1; Sclerotinia trifoliorum; RNA-Seq SwB9 {'strain': 'SwB9', 'tissue': 'Mycelium from in vitro culture', 'treatment': 'in vitro (Stcam)', 'source_name': '~20mm wide mycelium colony'} |
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| SRR12867757 | Mycelium from in vitro culture | - | - | 37565269 | N/A | |
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PRJNA670487 SRX9333824 SRP288036 fungi GSM4845077: AOPH-12_SwB9_CAM_3: PDA plate containing 50µM camalexin rep1; Sclerotinia trifoliorum; RNA-Seq SwB9 {'strain': 'SwB9', 'tissue': 'Mycelium from in vitro culture', 'treatment': 'in vitro (Stcam)', 'source_name': '~20mm wide mycelium colony'} |
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Literature
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