Potamogeton crispus
TaxID: 55318
Basic Information
Potamogeton crispus
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Potamogeton crispus, the crisp-leaved pondweed, curly pondweed, curly-leaf pondweed or curled pondweed, is a species of aquatic plant (hydrophyte) native to Eurasia but an introduced species and often a noxious weed in North America.
from Wikipedia
Taxonomic Information
Eukaryota
Streptophyta
Magnoliopsida
Alismatales
Potamogetonaceae
Potamogeton
Potamogeton crispus
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Species
k__Eukaryota;p__Streptophyta;c__Magnoliopsida;o__Alismatales;f__Potamogetonaceae;g__Potamogeton;s__Potamogeton crispus
Weeds
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (2 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_965783375.2 | Chromosome | 513 | 8777 | 19926 | - |
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laPotCris1.hap1.2 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR33678030 | leaf and stem | - | - | 44227432 | China:Jiangning,Nanjing | |
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PRJNA1246144 SRX28904467 SRP576294 weed RNA-seq of stem of Potamogeton crispus - - {'age': '-', 'tissue': 'leaf and stem', 'ecotype': '-', 'isolate': '-', 'cultivar': '-', 'dev_stage': '-', 'geo_loc_name': 'China:Jiangning,Nanjing', 'biosamplemodel': 'Plant', 'collection_date': '2022-09-01'} |
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| SRR33678029 | leaf and stem | - | - | 58285672 | China:Jiangning,Nanjing | |
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PRJNA1246144 SRX28904468 SRP576294 weed RNA-seq of stem of Potamogeton crispus, part2 - - {'age': '-', 'tissue': 'leaf and stem', 'ecotype': '-', 'isolate': '-', 'cultivar': '-', 'dev_stage': '-', 'geo_loc_name': 'China:Jiangning,Nanjing', 'biosamplemodel': 'Plant', 'collection_date': '2022-09-01'} |
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| ERR15696468 | - | - | hermaphrodite and monoecious | 56496999 | N/A | |
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PRJEB91200 ERX15100586 ERP174186 weed Illumina NovaSeq X paired end sequencing Illumina sequencing of sample accession SAMEA114389542 for study accession PRJEB91200. This submission includes reads tagged with the sequence GCGCCAAG. {'gal': 'Royal Botanic Garden Edinburgh', 'sex': 'hermaphrodite and monoecious', 'tolid': 'laPotCris1', 'habitat': 'in pond', 'lifestage': 'sporophyte', 'broker name': 'COPO', 'common name': 'curly-leaf pondweed', 'external id': 'SAMEA114389542', 'sample name': '650437e373310cdf41e957e2', 'specimen_id': 'EDTOL05656', 'collected_by': 'MARKUS RUHSAM', 'insdc status': 'public', 'project name': 'DTOL', 'submitter id': '650437e373310cdf41e957e2', 'gal_sample_id': 'EDTOL05656', 'identified_by': 'MARKUS RUHSAM', 'organism part': 'LEAF', 'collection date': '2023-06-08', 'ena-last-update': '2023-09-15T13:15:46Z', 'scientific_name': 'Potamogeton crispus', 'barcoding center': 'ROYAL BOTANIC GARDEN EDINBURGH', 'ena-first-public': '2023-09-15T13:15:46Z', 'specimen_voucher': 'NOT PROVIDED', 'insdc center name': 'EarlhamInstitute', 'insdc last update': '2023-09-15T13:15:46Z', 'insdc first public': '2023-09-15T13:15:46Z', 'sample derived from': 'SAMEA114389496', 'collecting institution': 'ROYAL BOTANIC GARDEN EDINBURGH', 'identifier_affiliation': 'ROYAL BOTANIC GARDEN EDINBURGH', 'voucher institution url': 'https://ror.org/0349vqz63', 'geographic location (latitude)': '55.998295', 'geographic location (longitude)': '-2.8750707', 'sample collection device or method': 'leaves were cut and put into FluidX tubes', 'geographic location (country and/or sea)': 'United Kingdom', 'geographic location (region and locality)': 'Scotland | Gosford House, Aberlady'} |
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Literature
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