Citrus leprosis virus C2
TaxID: 2052685
Basic Information
Citrus leprosis virus C2
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Taxonomic Information
unclassified
Kitrinoviricota
Alsuviricetes
Martellivirales
Kitaviridae
Cilevirus
Cilevirus colombiaense
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No Rank
k__unclassified;p__Kitrinoviricota;c__Alsuviricetes;o__Martellivirales;f__Kitaviridae;g__Cilevirus;s__Cilevirus colombiaense
Viruses/Viroids
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (19 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Austria | Quarantine pests | — |
| Belgium | Unknow | — |
| Czechia | — | |
| Germany | Unknow | — |
| Denmark | Quarantine pests | — |
| Estonia | Quarantine pests | — |
| European Union | Unknow | — |
| Finland | Unknow | — |
| Hungary | Unknow | — |
| Ireland | Unknow | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_002868615.1 | Complete Genome | - | 8 | 8 | - |
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ASM286861v1 |
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Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR22139840 | - | - | - | 25084215 | Colombia: Tolima, Chicoral | |
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PRJNA895362 SRX18119205 SRP405841 virus RNA-Seq of Hibiscus rosa-sinesis Ribo-depleted RNA sequencing THM {'host': 'Hibiscus', 'isolate': 'THM', 'lat_lon': 'not collected', 'env_medium': 'not collected', 'source_uvig': 'metatranscriptome (not viral targeted)', 'geo_loc_name': 'Colombia: Tolima, Chicoral', 'biosamplemodel': 'MIUVIG.plant-associated', 'env_broad_scale': 'not collected', 'env_local_scale': 'not collected'} |
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| SRR22139839 | - | - | - | 9743431 | Colombia: Meta, Restrepo | |
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PRJNA895362 SRX18119206 SRP405841 virus RNA-Seq of Citrus sinensis Ribo-depleted RNA sequencing MRNV {'host': 'Citrus sinensis', 'isolate': 'MRNV', 'lat_lon': 'not collected', 'env_medium': 'not collected', 'source_uvig': 'metatranscriptome (not viral targeted)', 'geo_loc_name': 'Colombia: Meta, Restrepo', 'biosamplemodel': 'MIUVIG.plant-associated', 'env_broad_scale': 'not collected', 'env_local_scale': 'not collected'} |
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| SRR22139838 | - | - | - | 23601610 | Colombia: Meta | |
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PRJNA895362 SRX18119207 SRP405841 virus RNA-Seq of Dieffenbachia Ribo-depleted RNA sequencing MGD {'host': 'Dieffenbachia', 'isolate': 'MGD', 'lat_lon': 'not collected', 'env_medium': 'not collected', 'source_uvig': 'metatranscriptome (not viral targeted)', 'geo_loc_name': 'Colombia: Meta', 'biosamplemodel': 'MIUVIG.plant-associated', 'env_broad_scale': 'not collected', 'env_local_scale': 'not collected'} |
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Literature
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