Chrysanthemum stem necrosis virus
TaxID: 83871
Basic Information
Chrysanthemum stem necrosis virus
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Taxonomic Information
unclassified
Negarnaviricota
Bunyaviricetes
Elliovirales
Tospoviridae
Orthotospovirus
Orthotospovirus chrysanthinecrocaulis
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No Rank
k__unclassified;p__Negarnaviricota;c__Bunyaviricetes;o__Elliovirales;f__Tospoviridae;g__Orthotospovirus;s__Orthotospovirus chrysanthinecrocaulis
Viruses/Viroids
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (28 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Austria | Quarantine pests | — |
| Belgium | Unknow | — |
| Belarus | Absent | — |
| Canada | Quarantine pests | — |
| Cuba | Absent | — |
| Germany | Unknow | — |
| European Union | Unknow | — |
| Finland | Unknow | — |
| United Kingdom | Unknow | — |
| Georgia | Absent | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCF_001343765.1 | Complete Genome | - | 8 | 8 | - |
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ViralMultiSegProj293212 |
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Transcriptomes (1 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR5630912 | - | - | - | 1171964 | Slovenia | |
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PRJNA380230 SRX2871018 SRP102461 virus RNA from CSNV infected plant sample Ribosomal RNA was depleted from the purified total RNA and sequencing libraries were prepared using the ScriptSeq Complete Kit (Illumina) NIB V38 {'host': 'Chrysanthemum sp.', 'isolate': 'NIB V38', 'lab_host': 'Nicotiana benthamiana', 'sample_type': 'plant leaf sample', 'geo_loc_name': 'Slovenia', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2001-10-03', 'isolation_source': 'Slovenia'} |
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Literature
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