Xanthomonas

TaxID: 338

Basic Information

Scientific Name *

Xanthomonas

Common Name

-

Introduction

Xanthomonas (from greek: xanthos – "yellow"; monas – "entity") is a genus of bacteria, many of which cause plant diseases. There are at least 27 plant associated Xanthomonas spp., that all together infect at least 400 plant species. Different species typically have specific host and/or tissue range and colonization strategies.

from Wikipedia

Taxonomic Information

Domain/Kingdom

Bacteria

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Species

unclassified

Subspecies

-

Photos (0 photos)

No photos available.

Morphological Features

No morphological description available.

Host Plants (0 host plants)

Data sources: EPPO Global Database and relevant literature.

No host plants available.

Quarantine Status (0 records)

Data sources: IPPC website and national quarantine websites; verified by human review.

No quarantine status records available.

Distribution (0 countries)

Data Sources: EPPO Global Database and GBIF.

0

Present

0

Absent

0

Unknown/Other

No distribution records available.

Genomes (0 records)

Data source: NCBI.

No genome records available.

Transcriptomes (3 records)

Data source: NCBI.

Run ID	Tissue	Developmental Stage	Sex	Read Count	Location	Actions
SRR38677469	cell culture	-	-	44238615	missing	Download NCBI
BioProject PRJNA1467453 Experiment ID SRX33483137 Study ID SRP701500 Category prokaryote Title GSM9741342: axenic Xvv____rep1; Xanthomonas vasicola pv. vasculorum; RNA-Seq Sample Attributes {'batch': 'NovaSeq #1, Run #0468', 'tissue': 'cell culture', 'genotype': 'Xvv', 'treatment': 'axenic control', 'source_name': 'cell culture'}
SRR38677468	cell culture	-	-	40991323	missing	Download NCBI
BioProject PRJNA1467453 Experiment ID SRX33483138 Study ID SRP701500 Category prokaryote Title GSM9741343: axenic Xvv____rep2; Xanthomonas vasicola pv. vasculorum; RNA-Seq Sample Attributes {'batch': 'NovaSeq #1, Run #0468', 'tissue': 'cell culture', 'genotype': 'Xvv', 'treatment': 'axenic control', 'source_name': 'cell culture'}
SRR38677467	cell culture	-	-	45770687	missing	Download NCBI
BioProject PRJNA1467453 Experiment ID SRX33483139 Study ID SRP701500 Category prokaryote Title GSM9741344: axenic Xvv____rep3; Xanthomonas vasicola pv. vasculorum; RNA-Seq Sample Attributes {'batch': 'NovaSeq #1, Run #0468', 'tissue': 'cell culture', 'genotype': 'Xvv', 'treatment': 'axenic control', 'source_name': 'cell culture'}

DNA Barcodes (89 records)

View all

Data source: BOLD.

Process ID	BIN	Marker	Length	Country	Date	Lat/Lon	Sequence
GBBAC7006-15	-	COI-5P	321	-	-	-	CTGGCCGCTGTCCCCGCCGCTGTCGCTGCAAGGCGGCTACAACGTGGCCTTCAGCGTGTTCGCGATCCACGTGGCCGGCGTCAGTTCGATCATGGGCGCGATCAACATCATCGCCACCGTGCTCAATATGCGCGCCCCCGGGATCGATCTGTTGAAGATGCCGATCTTCTGCTGGGCGTGGCTGATTACCGCGTTCCTGCTGATTGCGGTGATGCCGGTGCTGGCCGGCGCAGTGACCATGTTGCTGACCGACAAATTCTTCGGCACCAGTTTCTTCAATGCGGCCGGCGGCGGCGACCCGGTGATGTACCAGCACATCTT
GBBAC4842-15	-	COI-5P	666	Sri Lanka	1961-07-15	7.696631, 80.66931	ATGCTAGGCAAACTCACCATCGAGGCAGTTCCGTATCACGAGCCGATCATCATGGTCGCGCTGGGTGGTGCCGGCCTGCTCGGCCTGCTCATCGCGGGCGCCGTCACCAAGTACAAGCTGTGGGGCTATCTCTGGAAAGATTGGTTCACCTCGGTCGACCACAAACGCATCGGTGTGATGTACATCGTCGTGGCGCTGGTCATGCTGCTGCGCGGCTTTGCCGATGCGGCGATGATGCGTACCCAGCAGGCCCTGGTTGGCGGCGGTGGCGAGGGCGTATTTCCGCCGCACCACTACGACCAGATCTTCACCGCGCATGGCGTGATCATGATTTTCTTCATGGCCATGCCGTTCATGACCGGCCTGTTGAACCTGATCGTGCCGCTGCAGATCGGCGCGCGCGACGTCGCCTTCCCGTTTTTGAACTCGCTGAGCTTCTGGCTGTTCGTGGCGGGTGCGGCGCTGATCAACATCTCGCTGGGCGTCGGTGAATTCGCGCAGACCGGCTGGCTGGCGTATCCGCCGTTGTCCGGGCTGCAATACAGCCCAGGCGTCGGCGTGGATTACTACATCTGGGCGTTGCAGATCTCCGGATTAGGCACATTGCTGACCGGCGTGAACTTCTTCGTGACGATCATGCGGATGCGCGCGCCGGGCATGACGCTG
GBBAC3729-15	-	COI-5P	651	-	-	-	ATGGCCCATTCCGCAGTCGATCACCACGACGAGCACGGGCATTCGCAGAGCTTCGTCGCACGTTGGTTCTTTTCCACCAACCACAAGGACATCGGCACGCTGTACCTGCTCTTCAGCTTCACCATGTTCGTCATCGGTGCAGCGATGAGCGTGGTGATTCGTGCCGAGTTGGCGCAGCCGGGGTTGCAGTTCGTCAAGCCCGAGTTCTTCAACCAGATGACCACCGTGCATGCGCTGGTGATGATCTTCGGCGGGGTGATGCCGGCCTTCGTCGGCTTGGCCAACTGGATGATCCCACTGCAAATCGGCGCGCCGGACATGGCGTTGCCACGCATGAACAATTGGTCGTTCTGGCTATTGCCAGTGGCGTTCACCTTGCTGCTGTTGACCCTGTTCCTGCCCGGTGGTGCGCCAGCCGCCGGCTGGGCGATGTACCCGCCGTTGATGCTGCAGGGTGGTTACAACGTGGCCTTCTCGGTGTTCGCCATCCATGTGGCCGGCATCAGTTCGATCATGGGGGCGATCAACATCATCGCCACTGTGCTCAACATGCGCGCGCCGGGCATCTACCTGCTGAAGATGCCGATCTTCTGCTGGGCCTGGCTGATCACCGCGTTCCTGCTGATCGCGGTGATGCCGGTGCTGGCCGGC
GBBAC3532-15	-	COI-5P	651	-	-	-	ATGGCGCATACCGCAGTCGATCACCACGGACACCACCAGCCCGGTTTCGTCGAGCGCTGGTTCTTTTCGACCAATCACAAGGACATCGGCACGCTGTACCTGCTGTTTTCCTTCGTGATGTTCATCATCGGCGCGGCGATGAGCGTGGTGATTCGCGCCGAATTGATGCAGCCCGGCTTGCAGTTCGTCAAACCGGAATTCTTCAACCAGATGACCACCGTGCATGCACTGGTGATGATCTTCGGCGGCGTGATGCCGGCCTTCGTTGGCTTGGCCAACTGGATGATCCCGTTGCAGATCGGCGCACCGGACATGGCGTTGCCGCGCATGAACAACTGGTCGTTCTGGCTGCTGCCGGTCGCCTTTACGCTGCTGCTGCTGACGCTGTTTCTGCCGGGCGGCGGACCAGCGGGTGGCTGGACCTTGTACCCGCCGCTGTCGCTGCAAGGCGGCTACAACGTGGCTTTCAGCGTATTTGCGATCCATGTGGCCGGCGTCAGTTCGATCATGGGCGCGATCAACATCATCGCCACCGTGCTCAACATGCGCGCGCCGGGCATCGATCTGTTGAAGATGCCGATCTTCTGCTGGGCCTGGCTGATTACCGCCTTCCTGCTGATTGCGGTGATGCCGGTGCTGGCCGGCGCAGTG
GBBAC3527-15	-	COI-5P	651	-	-	-	ATGGCGCATACCGCAGTCGATCACCACGGACACCACCAGCCCGGTTTCGTCGAGCGCTGGTTCTTTTCGACCAATCACAAGGACATCGGCACGCTGTACCTGCTGTTTTCCTTCGTGATGTTCATCATCGGCGCGGCGATGAGCGTGGTGATTCGCGCCGAATTGATGCAGCCCGGCTTGCAGTTCGTCAAACCGGAATTCTTCAACCAGATGACCACCGTGCATGCACTGGTGATGATCTTCGGCGGCGTGATGCCGGCCTTCGTTGGCTTGGCCAACTGGATGATCCCGTTGCAGATCGGCGCACCGGACATGGCGTTGCCGCGCATGAACAACTGGTCGTTCTGGCTGCTGCCGGTCGCCTTTACGCTGCTGCTGCTGACGCTGTTTCTGCCGGGCGGCGGACCAGCGGGTGGCTGGACCTTGTACCCGCCGCTGTCGCTGCAAGGCGGCTACAACGTGGCTTTCAGCGTATTTGCGATCCATGTGGCCGGCGTCAGTTCGATCATGGGCGCGATCAACATCATCGCCACCGTGCTCAACATGCGCGCGCCGGGCATCGATCTGTTGAAGATGCCGATCTTCTGCTGGGCCTGGCTGATTACCGCCTTCCTGCTGATTGCGGTGATGCCGGTGCTGGCCGGCGCAGTG
GBBAC3525-15	-	COI-5P	651	-	-	-	ATGGCGCATACCGCAGTCGATCACCACGGACACCACCAGCCCGGTTTCGTCGAGCGCTGGTTCTTTTCGACCAATCACAAGGACATCGGCACGCTGTACCTGCTGTTTTCCTTCGTGATGTTCATCATCGGCGCGGCGATGAGCGTGGTGATTCGCGCCGAATTGATGCAGCCCGGCTTGCAGTTCGTCAAACCGGAATTCTTCAACCAGATGACCACCGTGCATGCACTGGTGATGATCTTCGGCGGCGTGATGCCGGCCTTCGTTGGCTTGGCCAACTGGATGATCCCGTTGCAGATCGGCGCACCGGACATGGCGTTGCCGCGCATGAACAACTGGTCGTTCTGGCTGCTGCCGGTCGCCTTTACGCTGCTGCTGCTGACGCTGTTTCTGCCGGGCGGCGGACCAGCGGGTGGCTGGACCTTGTACCCGCCGCTGTCGCTGCAAGGCGGCTACAACGTGGCTTTCAGCGTATTTGCGATCCATGTGGCCGGCGTCAGTTCGATCATGGGCGCGATCAACATCATCGCCACCGTGCTCAACATGCGCGCGCCGGGCATCGATCTGTTGAAGATGCCGATCTTCTGCTGGGCCTGGCTGATTACCGCCTTCCTGCTGATTGCGGTGATGCCGGTGCTGGCCGGCGCAGTG
GBBAC3368-15	-	COI-5P	651	-	-	-	ATGGCGCATACCGCAGTCGATCACCACGGACACCACCAGCCCGGTTTCGTCGAGCGCTGGTTCTTTTCTACCAATCACAAGGACATCGGCACCCTGTACCTGCTGTTTTCCTTCGTGATGTTCATCATCGGCGCGGCGATGAGCGTGGTGATTCGCGCCGAATTGATGCAGCCCGGCTTGCAGTTCGTCAAACCGGAATTCTTCAACCAGATGACCACCGTCCATGCACTGGTGATGATCTTCGGCGGCGTGATGCCGGCCTTCGTTGGCTTGGCCAACTGGATGATCCCGTTGCAGATCGGCGCACCGGACATGGCGTTGCCGCGCATGAACAACTGGTCGTTCTGGCTGCTGCCGGTCGCCTTTACGCTGCTGCTACTGACGCTGTTTCTGCCGGGCGGCGCACCAGCGGGTGGCTGGACCTTGTACCCGCCGCTGTCGCTGCAAGGCGGCTACAACGTGGCTTTCAGCGTATTTGCGATCCATGTGGCCGGCGTCAGTTCGATCATGGGCGCGATCAACATCATCGCCACCGTGCTCAACATGCGCGCGCCGGGCATCGATCTGTTGAAGATGCCGATCTTCTGCTGGGCCTGGCTGATTACCGCCTTCCTGCTGATTGCGGTGATGCCGGTGCTGGCCGGCGCAGTG
GBBAC3265-15	-	COI-5P	651	-	-	-	ATGGCGCATACCGCAGTCGATCACCACGGACACCACCAGCCCGGTTTCGTCGAGCGCTGGTTTTTCTCGACCAATCACAAGGATATCGGCACGCTGTATCTGCTGTTTTCCTTCGTGATGTTCATCATCGGCGCAGCGATGAGCGTGGTGATTCGCGCCGAATTGATGCAGCCCGGGTTGCAGTTCGTCAAACCCGAATTCTTCAACCAGATGACCACCGTGCACGCACTGGTGATGATCTTCGGTGGCGTGATGCCGGCTTTCGTCGGCTTGGCCAACTGGATGATTCCGCTGCAGATCGGCGCGCCGGACATGGCGCTGCCGCGCATGAACAACTGGTCGTTCTGGCTGCTGCCGGTCGCGTTCACCCTACTGTTGCTGACGTTGTTTCTGCCAGGCGGTGCGCCGGCCGGTGGCTGGACGCTGTACCCGCCGCTGTCGCTGCAGGGTGGCTACAACGTGGCCTTCAGCGTATTTGCGATCCATGTCGCCGGCGTCAGTTCGATCATGGGCGCGATCAACATCATCGCCACCGTGCTCAACATGCGTGCACCCGGTATCGATCTGTTGAAGATGCCGATCTTCTGCTGGGCCTGGCTGATCACCGCGTTCCTGCTGATCGCAGTGATGCCGGTGCTGGCCGGTGCGGTG
GBBAC3218-15	-	COI-5P	651	-	-	-	ATGGCGCATACCGCAGTCGATCACCACGGACACCACCAGCCCGGTTTCGTCGAGCGCTGGTTCTTTTCGACCAATCACAAGGATATCGGCACGTTGTATCTGCTGTTTTCCTTCGTGATGTTCATCATCGGCGCGGCGATGAGCGTGGTGATTCGCGCCGAATTGATGCAGCCCGGCTTGCAGTTCGTCAAACCGGAGTTCTTCAACCAGATGACCACCGTGCATGCACTGGTGATGATCTTCGGCGGCGTGATGCCGGCTTTCGTCGGCTTGGCCAACTGGATGATTCCGTTGCAGATCGGTGCGCCGGACATGGCGTTGCCGCGCATGAACAACTGGTCGTTCTGGTTGTTGCCGGTCGCCTTTACCCTGCTGCTGCTGACGCTGTTCCTGCCGGGCGGCGCGCCGGCAGGCGGCTGGACGCTGTACCCGCCGCTGTCGCTGCAGGGCGGCTACAACGTCGCCTTCAGCGTGTTTGCGATCCACGTGGCCGGCGTCAGCTCGATCATGGGCGCGATCAACATCATCGCCACCGTGCTGAACATGCGCGCGCCAGGCATCGATCTGCTCAAGATGCCGATCTTCTGCTGGGCCTGGCTGATCACCGCGTTCCTGCTGATCGCGGTGATGCCGGTGCTGGCCGGCGCGGTG
GBBAC3164-15	-	COI-5P	651	-	-	-	ATGGCGCATACCGCAGTCGATCACCACGGACACCACCAGCCCGGCTTTGTCGAGCGCTGGTTCTTTTCGACCAATCACAAGGACATCGGCACGCTGTATCTGCTGTTCTCCTTCGTGATGTTCATCATTGGCGCGGCGATGAGCGTGGTGATCCGCGCTGAACTCATGCAGCCGGGGCTGCAGTTCGTCAAGCCCGAATTCTTCAACCAGATGACCACCGTGCATGCGCTGGTGATGATTTTCGGTGGGGTGATGCCGGCCTTTGTGGGTCTGGCGAACTGGATGATTCCGCTGCAGATCGGCGCGCCGGACATGGCGCTGCCGCGCATGAACAACTGGTCGTTCTGGTTGCTGCCGGTTGCCTTCACCTTGTTGTTGCTGACGTTGTTCCTGCCCGGAGGCGCGCCGGCCGGTGGCTGGACGCTGTATCCGCCGCTGTCGCTGCAGGGCGGTTACAACGTGGCCTTTAGCGTGTTTGCGATTCACGTGGCTGGCGTCAGTTCGATCATGGGCGCGATCAATATCATCGCCACCGTGCTCAACATGCGCGCGCCCGGCATCGATCTGCTCAAGATGCCGATCTTCTGCTGGGCCTGGCTGATCACCGCGTTCCTCTTGATCGCGGTGATGCCGGTGCTCGCCGGTGCGGTC

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Xanthomonas

Basic Information

Taxonomic Information

Photos (0 photos)

Morphological Features

Host Plants (0 host plants)

Quarantine Status (0 records)

Distribution (0 countries)

Genomes (0 records)

Transcriptomes (3 records)

DNA Barcodes (89 records)

Literature

State Information