Epichloe typhina
TaxID: 5113
Basic Information
Epichloe typhina
-
Taxonomic Information
Eukaryota
Ascomycota
Sordariomycetes
Hypocreales
Clavicipitaceae
Epichloe
Epichloe typhina
-
Species
k__Eukaryota;p__Ascomycota;c__Sordariomycetes;o__Hypocreales;f__Clavicipitaceae;g__Epichloe;s__Epichloe typhina
Fungal organisms
Photos (0 photos)
No photos available.
Morphological Features
No morphological description available.
Host Plants (0 host plants)
Data sources: EPPO Global Database and relevant literature.
No host plants available.
Quarantine Status (1 records)
Data sources: IPPC website and national quarantine websites; verified by human review.
| Country | Status | Year Added |
|---|---|---|
| Greece | Quarantine pests | — |
Distribution (0 countries)
Data Sources: EPPO Global Database and GBIF.
No distribution records available.
Genomes (1 records)
Data source: NCBI.
| Assembly Accession | Assembly Level | Genome Size(Mb) | Contig N50(Kb) | Scaffold N50(Kb) | BUSCO% | Downloads | Actions |
|---|---|---|---|---|---|---|---|
| GCA_023658615.1 | Complete Genome | 39 | 6342 | 6342 | - |
|
|
|
ASM2365861v1 |
|||||||
Transcriptomes (3 records)
Data source: NCBI.
| Run ID | Tissue | Developmental Stage | Sex | Read Count | Location | Actions |
|---|---|---|---|---|---|---|
| SRR13685311 | - | - | - | 160837494 | Switzerland: Aubonne | |
|
PRJNA533210 SRX10074649 SRP305781 fungi RNAseq data Epichloe typhina in-planta Dactylis glomerata Illumina TruSeq RNA kit 1756 {'host': 'Dactylis glomerata', 'strain': '1756', 'sample_type': 'culture', 'geo_loc_name': 'Switzerland: Aubonne', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2017-09-26'} |
||||||
| SRR13685314 | - | - | - | 34033097 | Switzerland: Soglio | |
|
PRJNA533212 SRX10074650 SRP305783 fungi RNAseq data Epichloe clarkii axenic culture Illumina TruSeq RNA kit 1605_22 {'host': 'Holcus lanatus', 'strain': '1605_22', 'sample_type': 'culture', 'geo_loc_name': 'Switzerland: Soglio', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2016-06-16'} |
||||||
| SRR13685313 | - | - | - | 176044243 | Switzerland: Soglio | |
|
PRJNA533212 SRX10074651 SRP305783 fungi RNAseq data Epichloe clarkii in-planta Holcus lanatus Illumina TruSeq RNA kit 1605_22 {'host': 'Holcus lanatus', 'strain': '1605_22', 'sample_type': 'culture', 'geo_loc_name': 'Switzerland: Soglio', 'biosamplemodel': 'Microbe, viral or environmental', 'collection_date': '2016-06-16'} |
||||||
Literature
Fetching literature from NCBI PubMed...
Failed to fetch literature